DSuite
Overview
Fast D‐statistics and related admixture evidence from VCF files
Availability
| Cluster | Module/Version |
|---|---|
| BOSE | dsuite/0.4 |
| BGSC | dsuite/0.4 |
Note: You can simply use module load dsuite to activate the most recently installed version of this software.
Sample Slurm Script
submit.sh
#!/bin/bash
# -- SLURM SETTINGS -- #
# [..] other settings here [..]
# The following settings are for the overall request to Slurm
#SBATCH --ntasks-per-node=32 # How many CPU cores do you want to request
#SBATCH --nodes=1 # How many nodes do you want to request
# -- SCRIPT COMMANDS -- #
# Load the needed modules
module load dsuite # Load DSuite
Dsuite Dtrios input.vcf SETS.txt
Real Example
Has your research group used DSuite in a project? Contact the HPC Team and we'd be glad to feature your work.
Citation
Please include the following citation in your papers to support continued development of DSuite.
Malinsky, M., Matschiner, M. and Svardal, H. (2021) Dsuite ‐ fast D‐statistics and related admixture evidence from VCF files. Molecular Ecology Resources 21, 584–595. doi: https://doi.org/10.1111/1755-0998.13265